Evolutionary Biology

All Together Now: Joint Codon Alignment, Ohmic Networks, and Error-Controlled Selection Inference in HyPhy 3
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Cohabiting microbes can impact one another's mutation rates creating a mutational eco-evo feedback loop
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Temporally Dynamic Waves of Selection on Archaic Variation in Peruvians
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Chaperone mRNA secondary structure does not strongly track thermal adaptation in bacteria, but groL coding sequence shortens in its disordered C-terminal tail
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Ocean current models predict spatial structure for coastal biodiversity
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BryoCAD: Extending Plant DNA Foundation Models Beyond Flowering Plants
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PHYLOGENETIC SUPPORT FOR THE EVOLUTION OF APOSEMATISM BEFORE GREGARIOUSNESS IN CONIFER SAWFLIES
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Historical adaptation to transposable element invasions in Drosophila is primarily due to insertions in existing piRNA clusters
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Shared landscape, divergent genomes: Comparative population genomics of co-occurring flora in an isolated Australian mountain range
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Why don't transcription factors exploit inter-nucleotide correlations in binding motifs? Evolution of information encoding strategies on DNA
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Evolutionary games on networks with negative edge-based environmental feedback
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The structure and evolution of sex chromosomes in an androdioecious species with two mating types.
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A coral-linked adaptive radiation in butterflyfishes
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Parallel Trajectories in the Evolution of C-class MADS-box Genes in Flowering Plants and Conifers
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Evolutionary dynamics of the pan-centromere architecture in oaks
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Genomic signatures of positive selection and relaxed selective constraints associated with convergent dietary specialisation
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Chemosensory receptor copy number evolution is not associated with host-plant specialization in butterflies
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Both genetic and social inheritance influence female aggressive and submissive behavior in a wild primate
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Temporal changes in genetic variation during the invasion of Lygodium japonicum in North America
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How Fisherian runaway halts: Genomic architecture determines the long-term evolutionary consequences of sexual selection.
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Continental scale genetic diversity supports geo-clustered ecoregions connectivity
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A new Serratia taxon found in a trombidiform mite shows genomic evidence of host adaptation but is phylogenetically distinct from Serratia symbiotica
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Phenotypic plasticity segregates antagonistic species but undermines their coexistence
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Genomic architecture of the major histocompatibility complex genes in the Neotropical Midas cichlid
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Heat-evolved strains of the coral symbiont Cladocopium proliferum have diverged in exon usage
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Evolutionary and acclimatory shifts in ion transporter gene expression across salinity transitions in the copepod Eurytemora carolleeae
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Sex-specific growth in invasive pink salmon (Oncorhynchus gorbuscha) from two regions in northern Norway
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Life on leaves left a lasting mark on the Methylobacterium core genome
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Steering Before Selection: Energy-Limited Developmental Control as a Phenotypic Capacitor, a Pre-Specified Simulation Study
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Parallel and lineage-dependent mitonuclear evolution in threespine stickleback
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Adaptation and conservation of turtle visual opsins over a deep phylogenetic divergence
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Inferring modularity in genotype-phenotype maps using patterns of epistasis and pleiotropy
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