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Image and Video Processing (eess.IV)

Fri, 14 Apr 2023

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1.Bitstream-Corrupted JPEG Images are Restorable: Two-stage Compensation and Alignment Framework for Image Restoration

Authors:Wenyang Liu, Yi Wang, Kim-Hui Yap, Lap-Pui Chau

Abstract: In this paper, we study a real-world JPEG image restoration problem with bit errors on the encrypted bitstream. The bit errors bring unpredictable color casts and block shifts on decoded image contents, which cannot be resolved by existing image restoration methods mainly relying on pre-defined degradation models in the pixel domain. To address these challenges, we propose a robust JPEG decoder, followed by a two-stage compensation and alignment framework to restore bitstream-corrupted JPEG images. Specifically, the robust JPEG decoder adopts an error-resilient mechanism to decode the corrupted JPEG bitstream. The two-stage framework is composed of the self-compensation and alignment (SCA) stage and the guided-compensation and alignment (GCA) stage. The SCA adaptively performs block-wise image color compensation and alignment based on the estimated color and block offsets via image content similarity. The GCA leverages the extracted low-resolution thumbnail from the JPEG header to guide full-resolution pixel-wise image restoration in a coarse-to-fine manner. It is achieved by a coarse-guided pix2pix network and a refine-guided bi-directional Laplacian pyramid fusion network. We conduct experiments on three benchmarks with varying degrees of bit error rates. Experimental results and ablation studies demonstrate the superiority of our proposed method. The code will be released at https://github.com/wenyang001/Two-ACIR.

2.Hierarchical Agent-based Reinforcement Learning Framework for Automated Quality Assessment of Fetal Ultrasound Video

Authors:Sijing Liu, Qilong Ying, Shuangchi He, Xin Yang, Dong Ni, Ruobing Huang

Abstract: Ultrasound is the primary modality to examine fetal growth during pregnancy, while the image quality could be affected by various factors. Quality assessment is essential for controlling the quality of ultrasound images to guarantee both the perceptual and diagnostic values. Existing automated approaches often require heavy structural annotations and the predictions may not necessarily be consistent with the assessment results by human experts. Furthermore, the overall quality of a scan and the correlation between the quality of frames should not be overlooked. In this work, we propose a reinforcement learning framework powered by two hierarchical agents that collaboratively learn to perform both frame-level and video-level quality assessments. It is equipped with a specially-designed reward mechanism that considers temporal dependency among frame quality and only requires sparse binary annotations to train. Experimental results on a challenging fetal brain dataset verify that the proposed framework could perform dual-level quality assessment and its predictions correlate well with the subjective assessment results.

3.Perceptual Quality Assessment of Face Video Compression: A Benchmark and An Effective Method

Authors:Yixuan Li, Bolin Chen, Baoliang Chen, Meng Wang, Shiqi Wang

Abstract: Recent years have witnessed an exponential increase in the demand for face video compression, and the success of artificial intelligence has expanded the boundaries beyond traditional hybrid video coding. Generative coding approaches have been identified as promising alternatives with reasonable perceptual rate-distortion trade-offs, leveraging the statistical priors of face videos. However, the great diversity of distortion types in spatial and temporal domains, ranging from the traditional hybrid coding frameworks to generative models, present grand challenges in compressed face video quality assessment (VQA). In this paper, we introduce the large-scale Compressed Face Video Quality Assessment (CFVQA) database, which is the first attempt to systematically understand the perceptual quality and diversified compression distortions in face videos. The database contains 3,240 compressed face video clips in multiple compression levels, which are derived from 135 source videos with diversified content using six representative video codecs, including two traditional methods based on hybrid coding frameworks, two end-to-end methods, and two generative methods. In addition, a FAce VideO IntegeRity (FAVOR) index for face video compression was developed to measure the perceptual quality, considering the distinct content characteristics and temporal priors of the face videos. Experimental results exhibit its superior performance on the proposed CFVQA dataset. The benchmark is now made publicly available at: https://github.com/Yixuan423/Compressed-Face-Videos-Quality-Assessment.

4.Weighted Siamese Network to Predict the Time to Onset of Alzheimer's Disease from MRI Images

Authors:Misgina Tsighe Hagos, Niamh Belton, Ronan P. Killeen, Kathleen M. Curran, Brian Mac Namee

Abstract: Alzheimer's Disease (AD), which is the most common cause of dementia, is a progressive disease preceded by Mild Cognitive Impairment (MCI). Early detection of the disease is crucial for making treatment decisions. However, most of the literature on computer-assisted detection of AD focuses on classifying brain images into one of three major categories: healthy, MCI, and AD; or categorising MCI patients into one of (1) progressive: those who progress from MCI to AD at a future examination time during a given study period, and (2) stable: those who stay as MCI and never progress to AD. This misses the opportunity to accurately identify the trajectory of progressive MCI patients. In this paper, we revisit the brain image classification task for AD identification and re-frame it as an ordinal classification task to predict how close a patient is to the severe AD stage. To this end, we select progressive MCI patients from the Alzheimer's Disease Neuroimaging Initiative (ADNI) dataset and construct an ordinal dataset with a prediction target that indicates the time to progression to AD. We train a siamese network model to predict the time to onset of AD based on MRI brain images. We also propose a weighted variety of siamese networks and compare its performance to a baseline model. Our evaluations show that incorporating a weighting factor to siamese networks brings considerable performance gain at predicting how close input brain MRI images are to progressing to AD.

5.Cross Attention Transformers for Multi-modal Unsupervised Whole-Body PET Anomaly Detection

Authors:Ashay Patel, Petru-Danial Tudiosu, Walter H. L. Pinaya, Gary Cook, Vicky Goh, Sebastien Ourselin, M. Jorge Cardoso

Abstract: Cancer is a highly heterogeneous condition that can occur almost anywhere in the human body. 18F-fluorodeoxyglucose is an imaging modality commonly used to detect cancer due to its high sensitivity and clear visualisation of the pattern of metabolic activity. Nonetheless, as cancer is highly heterogeneous, it is challenging to train general-purpose discriminative cancer detection models, with data availability and disease complexity often cited as a limiting factor. Unsupervised anomaly detection models have been suggested as a putative solution. These models learn a healthy representation of tissue and detect cancer by predicting deviations from the healthy norm, which requires models capable of accurately learning long-range interactions between organs and their imaging patterns with high levels of expressivity. Such characteristics are suitably satisfied by transformers, which have been shown to generate state-of-the-art results in unsupervised anomaly detection by training on normal data. This work expands upon such approaches by introducing multi-modal conditioning of the transformer via cross-attention i.e. supplying anatomical reference from paired CT. Using 294 whole-body PET/CT samples, we show that our anomaly detection method is robust and capable of achieving accurate cancer localization results even in cases where normal training data is unavailable. In addition, we show the efficacy of this approach on out-of-sample data showcasing the generalizability of this approach with limited training data. Lastly, we propose to combine model uncertainty with a new kernel density estimation approach, and show that it provides clinically and statistically significant improvements when compared to the classic residual-based anomaly maps. Overall, a superior performance is demonstrated against leading state-of-the-art alternatives, drawing attention to the potential of these approaches.

6.Robust thalamic nuclei segmentation from T1-weighted MRI

Authors:Julie P. Vidal, Lola Danet, Patrice Péran, Jérémie Pariente, Meritxell Bach Cuadra, Natalie M. Zahr, Emmanuel J. Barbeau, Manojkumar Saranathan

Abstract: Accurate segmentation of thalamic nuclei, crucial for understanding their role in healthy cognition and in pathologies, is challenging to achieve on standard T1-weighted (T1w) magnetic resonance imaging (MRI) due to poor image contrast. White-matter-nulled (WMn) MRI sequences improve intrathalamic contrast but are not part of clinical protocols or extant databases. Here, we introduce Histogram-based polynomial synthesis (HIPS), a fast preprocessing step that synthesizes WMn-like image contrast from standard T1w MRI using a polynomial approximation. HIPS was incorporated into our Thalamus Optimized Multi-Atlas Segmentation (THOMAS) pipeline, developed and optimized for WMn MRI. HIPS-THOMAS was compared to a convolutional neural network (CNN)-based segmentation method and THOMAS modified for T1w images (T1w-THOMAS). The robustness and accuracy of the three methods were tested across different image contrasts, scanner manufacturers, and field strength. HIPS-synthesized images improved intra-thalamic contrast and thalamic boundaries, and their segmentations yielded significantly better mean Dice, lower percentage of volume error, and lower standard deviations compared to both the CNN method and T1w-THOMAS. Finally, using THOMAS, HIPS-synthesized images were as effective as WMn images for identifying thalamic nuclei atrophy in alcohol use disorders subjects relative to healthy controls, with a higher area under the ROC curve compared to T1w-THOMAS (0.79 vs 0.73).

7.The University of California San Francisco, Brain Metastases Stereotactic Radiosurgery (UCSF-BMSR) MRI Dataset

Authors:Jeffrey D. Rudie, Rachit Saluja David A. Weiss, Pierre Nedelec, Evan Calabrese, John B. Colby, Benjamin Laguna, John Mongan, Steve Braunstein, Christopher P. Hess, Andreas M. Rauschecker, Leo P. Sugrue, Javier E. Villanueva-Meyer

Abstract: The University of California San Francisco Brain Metastases Stereotactic Radiosurgery (UCSF-BMSR) dataset is a public, clinical, multimodal brain MRI dataset consisting of 560 brain MRIs from 412 patients with expert annotations of 5136 brain metastases. Data consists of registered and skull stripped T1 post-contrast, T1 pre-contrast, FLAIR and subtraction (T1 pre-contrast - T1 post-contrast) images and voxelwise segmentations of enhancing brain metastases in NifTI format. The dataset also includes patient demographics, surgical status and primary cancer types. The UCSF-BSMR has been made publicly available in the hopes that researchers will use these data to push the boundaries of AI applications for brain metastases.

8.CAD-RADS scoring of coronary CT angiography with Multi-Axis Vision Transformer: a clinically-inspired deep learning pipeline

Authors:Alessia Gerbasi, Arianna Dagliati, Giuseppe Albi, Mattia Chiesa, Daniele Andreini, Andrea Baggiano, Saima Mushtaq, Gianluca Pontone, Riccardo Bellazzi, Gualtiero Colombo

Abstract: The standard non-invasive imaging technique used to assess the severity and extent of Coronary Artery Disease (CAD) is Coronary Computed Tomography Angiography (CCTA). However, manual grading of each patient's CCTA according to the CAD-Reporting and Data System (CAD-RADS) scoring is time-consuming and operator-dependent, especially in borderline cases. This work proposes a fully automated, and visually explainable, deep learning pipeline to be used as a decision support system for the CAD screening procedure. The pipeline performs two classification tasks: firstly, identifying patients who require further clinical investigations and secondly, classifying patients into subgroups based on the degree of stenosis, according to commonly used CAD-RADS thresholds. The pipeline pre-processes multiplanar projections of the coronary arteries, extracted from the original CCTAs, and classifies them using a fine-tuned Multi-Axis Vision Transformer architecture. With the aim of emulating the current clinical practice, the model is trained to assign a per-patient score by stacking the bi-dimensional longitudinal cross-sections of the three main coronary arteries along channel dimension. Furthermore, it generates visually interpretable maps to assess the reliability of the predictions. When run on a database of 1873 three-channel images of 253 patients collected at the Monzino Cardiology Center in Milan, the pipeline obtained an AUC of 0.87 and 0.93 for the two classification tasks, respectively. According to our knowledge, this is the first model trained to assign CAD-RADS scores learning solely from patient scores and not requiring finer imaging annotation steps that are not part of the clinical routine.