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Image and Video Processing (eess.IV)

Fri, 14 Jul 2023

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1.cOOpD: Reformulating COPD classification on chest CT scans as anomaly detection using contrastive representations

Authors:Silvia D. Almeida, Carsten T. Lüth, Tobias Norajitra, Tassilo Wald, Marco Nolden, Paul F. Jaeger, Claus P. Heussel, Jürgen Biederer, Oliver Weinheimer, Klaus Maier-Hein

Abstract: Classification of heterogeneous diseases is challenging due to their complexity, variability of symptoms and imaging findings. Chronic Obstructive Pulmonary Disease (COPD) is a prime example, being underdiagnosed despite being the third leading cause of death. Its sparse, diffuse and heterogeneous appearance on computed tomography challenges supervised binary classification. We reformulate COPD binary classification as an anomaly detection task, proposing cOOpD: heterogeneous pathological regions are detected as Out-of-Distribution (OOD) from normal homogeneous lung regions. To this end, we learn representations of unlabeled lung regions employing a self-supervised contrastive pretext model, potentially capturing specific characteristics of diseased and healthy unlabeled regions. A generative model then learns the distribution of healthy representations and identifies abnormalities (stemming from COPD) as deviations. Patient-level scores are obtained by aggregating region OOD scores. We show that cOOpD achieves the best performance on two public datasets, with an increase of 8.2% and 7.7% in terms of AUROC compared to the previous supervised state-of-the-art. Additionally, cOOpD yields well-interpretable spatial anomaly maps and patient-level scores which we show to be of additional value in identifying individuals in the early stage of progression. Experiments in artificially designed real-world prevalence settings further support that anomaly detection is a powerful way of tackling COPD classification.

2.Frequency Domain Adversarial Training for Robust Volumetric Medical Segmentation

Authors:Asif Hanif, Muzammal Naseer, Salman Khan, Mubarak Shah, Fahad Shahbaz Khan

Abstract: It is imperative to ensure the robustness of deep learning models in critical applications such as, healthcare. While recent advances in deep learning have improved the performance of volumetric medical image segmentation models, these models cannot be deployed for real-world applications immediately due to their vulnerability to adversarial attacks. We present a 3D frequency domain adversarial attack for volumetric medical image segmentation models and demonstrate its advantages over conventional input or voxel domain attacks. Using our proposed attack, we introduce a novel frequency domain adversarial training approach for optimizing a robust model against voxel and frequency domain attacks. Moreover, we propose frequency consistency loss to regulate our frequency domain adversarial training that achieves a better tradeoff between model's performance on clean and adversarial samples. Code is publicly available at https://github.com/asif-hanif/vafa.

3.Reconstructing Three-decade Global Fine-Grained Nighttime Light Observations by a New Super-Resolution Framework

Authors:Jinyu Guo, Feng Zhang, Hang Zhao, Baoxiang Pan, Linlu Mei

Abstract: Satellite-collected nighttime light provides a unique perspective on human activities, including urbanization, population growth, and epidemics. Yet, long-term and fine-grained nighttime light observations are lacking, leaving the analysis and applications of decades of light changes in urban facilities undeveloped. To fill this gap, we developed an innovative framework and used it to design a new super-resolution model that reconstructs low-resolution nighttime light data into high resolution. The validation of one billion data points shows that the correlation coefficient of our model at the global scale reaches 0.873, which is significantly higher than that of other existing models (maximum = 0.713). Our model also outperforms existing models at the national and urban scales. Furthermore, through an inspection of airports and roads, only our model's image details can reveal the historical development of these facilities. We provide the long-term and fine-grained nighttime light observations to promote research on human activities. The dataset is available at \url{https://doi.org/10.5281/zenodo.7859205}.

4.BiGSeT: Binary Mask-Guided Separation Training for DNN-based Hyperspectral Anomaly Detection

Authors:Haijun Liu, Xi Su, Xiangfei Shen, Lihui Chen, Xichuan Zhou

Abstract: Hyperspectral anomaly detection (HAD) aims to recognize a minority of anomalies that are spectrally different from their surrounding background without prior knowledge. Deep neural networks (DNNs), including autoencoders (AEs), convolutional neural networks (CNNs) and vision transformers (ViTs), have shown remarkable performance in this field due to their powerful ability to model the complicated background. However, for reconstruction tasks, DNNs tend to incorporate both background and anomalies into the estimated background, which is referred to as the identical mapping problem (IMP) and leads to significantly decreased performance. To address this limitation, we propose a model-independent binary mask-guided separation training strategy for DNNs, named BiGSeT. Our method introduces a separation training loss based on a latent binary mask to separately constrain the background and anomalies in the estimated image. The background is preserved, while the potential anomalies are suppressed by using an efficient second-order Laplacian of Gaussian (LoG) operator, generating a pure background estimate. In order to maintain separability during training, we periodically update the mask using a robust proportion threshold estimated before the training. In our experiments, We adopt a vanilla AE as the network to validate our training strategy on several real-world datasets. Our results show superior performance compared to some state-of-the-art methods. Specifically, we achieved a 90.67% AUC score on the HyMap Cooke City dataset. Additionally, we applied our training strategy to other deep network structures, achieving improved detection performance compared to their original versions, demonstrating its effective transferability. The code of our method will be available at https://github.com/enter-i-username/BiGSeT.

5.Atlas-Based Interpretable Age Prediction

Authors:Sophie Starck, Yadunandan Vivekanand Kini, Jessica Johanna Maria Ritter, Rickmer Braren, Daniel Rueckert, Tamara Mueller

Abstract: Age prediction is an important part of medical assessments and research. It can aid in detecting diseases as well as abnormal ageing by highlighting the discrepancy between chronological and biological age. To gain a comprehensive understanding of age-related changes observed in various body parts, we investigate them on a larger scale by using whole-body images. We utilise the Grad-CAM interpretability method to determine the body areas most predictive of a person's age. We expand our analysis beyond individual subjects by employing registration techniques to generate population-wide interpretability maps. Furthermore, we set state-of-the-art whole-body age prediction with a model that achieves a mean absolute error of 2.76 years. Our findings reveal three primary areas of interest: the spine, the autochthonous back muscles, and the cardiac region, which exhibits the highest importance.

6.Brain Tumor Detection using Convolutional Neural Networks with Skip Connections

Authors:Aupam Hamran, Marzieh Vaeztourshizi, Amirhossein Esmaili, Massoud Pedram

Abstract: In this paper, we present different architectures of Convolutional Neural Networks (CNN) to analyze and classify the brain tumors into benign and malignant types using the Magnetic Resonance Imaging (MRI) technique. Different CNN architecture optimization techniques such as widening and deepening of the network and adding skip connections are applied to improve the accuracy of the network. Results show that a subset of these techniques can judiciously be used to outperform a baseline CNN model used for the same purpose.