Machine Learning (stat.ML)

Abstract: Causal datasets play a critical role in advancing the field of causality. However, existing datasets often lack the complexity of real-world issues such as selection bias, unfaithful data, and confounding. To address this gap, we propose a new synthetic causal dataset, the Structurally Complex with Additive paRent causalitY (SCARY) dataset, which includes the following features. The dataset comprises 40 scenarios, each generated with three different seeds, allowing researchers to leverage relevant subsets of the dataset. Additionally, we use two different data generation mechanisms for generating the causal relationship between parents and child nodes, including linear and mixed causal mechanisms with multiple sub-types. Our dataset generator is inspired by the Causal Discovery Toolbox and generates only additive models. The dataset has a Varsortability of 0.5. Our SCARY dataset provides a valuable resource for researchers to explore causal discovery under more realistic scenarios. The dataset is available at https://github.com/JayJayc/SCARY.

Abstract: Many techniques in machine learning attempt explicitly or implicitly to infer a low-dimensional manifold structure of an underlying physical phenomenon from measurements without an explicit model of the phenomenon or the measurement apparatus. This paper presents a cautionary tale regarding the discrepancy between the geometry of measurements and the geometry of the underlying phenomenon in a benign setting. The deformation in the metric illustrated in this paper is mathematically straightforward and unavoidable in the general case, and it is only one of several similar effects. While this is not always problematic, we provide an example of an arguably standard and harmless data processing procedure where this effect leads to an incorrect answer to a seemingly simple question. Although we focus on manifold learning, these issues apply broadly to dimensionality reduction and unsupervised learning.

Abstract: Annealed Importance Sampling (AIS) moves particles along a Markov chain from a tractable initial distribution to an intractable target distribution. The recently proposed Differentiable AIS (DAIS) (Geffner and Domke, 2021; Zhang et al., 2021) enables efficient optimization of the transition kernels of AIS and of the distributions. However, we observe a low effective sample size in DAIS, indicating degenerate distributions. We thus propose to extend DAIS by a resampling step inspired by Sequential Monte Carlo. Surprisingly, we find empirically-and can explain theoretically-that it is not necessary to differentiate through the resampling step which avoids gradient variance issues observed in similar approaches for Particle Filters (Maddison et al., 2017; Naesseth et al., 2018; Le et al., 2018).