1.Ecologically mapped neuronal identity: Towards standardizing activity across heterogeneous experiments

Authors:Kevin Luxem, David Eriksson

Abstract: The brain's diversity of neurons enables a rich behavioral repertoire and flexible adaptation to new situations. Assuming that the ecological pressure has optimized this neuronal variety, we propose exploiting na\"ive behavior to map the neuronal identity. Here we investigate the feasibility of identifying neurons "ecologically" using their activation for natural behavioral and environmental parameters. Such a neuronal ECO-marker might give a finer granularity than possible with genetic or molecular markers, thereby facilitating the comparison of the functional characteristics of individual neurons across animals. In contrast to a potential mapping using artificial stimuli and trained behavior which have an unlimited parameter space, an ecological mapping is experimentally feasible since it is bounded by the ecology. Home-cage environment is an excellent basis for this ECO-mapping covering an extensive behavioral repertoire and since home-cage behavior is similar across laboratories. We review the possibility of adding area-specific environmental enrichment and automatized behavioral tasks to identify neurons in specific brain areas. In this work, we focus on the visual cortex, motor cortex, prefrontal cortex, and hippocampus. Fundamental to achieving this identification is to take advantage of state-of-the-art behavioral tracking, sensory stimulation protocols, and the plethora of creative behavioral solutions for rodents. We find that motor areas might be easiest to address, followed by prefrontal, hippocampal, and visual areas. The possibility of acquiring a near-complete ecological identification with minimal animal handling, minimal constraints on the main experiment, and data compatibility across laboratories might outweigh the necessity of implanting electrodes or imaging devices.

2.Incomplete hippocampal inversion and hippocampal subfield volumes: Implementation and inter-reliability of automatic segmentation

Authors:Agustina Fragueiro EMPENN, Giorgia Committeri Ud'A, Claire Cury EMPENN

Abstract: The incomplete hippocampal inversion (IHI) is an atypical anatomical pattern of the hippocampus. However, the hippocampus is not a homogeneous structure, as it consists of segregated subfields with specific characteristics. While IHI is not related to whole hippocampal volume, higher IHI scores have been associated to smaller CA1 in aging. Although the segmentation of hippocampal subfields is challenging due to their small size, there are algorithms allowing their automatic segmentation. By using a Human Connectome Project dataset of healthy young adults, we first tested the inter-reliability of two methods for automatic segmentation of hippocampal subfields, and secondly, we explored the relationship between IHI and subfield volumes. Results evidenced strong correlations between volumes obtained thorough both segmentation methods. Furthermore, higher IHI scores were associated to bigger subiculum and smaller CA1 volumes. Here, we provide new insights regarding IHI subfields volumetry, and we offer support for automatic segmentation inter-method reliability.