racoon_clip - a complete pipeline for single-nucleotide analyses of iCLIP and eCLIP data
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racoon_clip - a complete pipeline for single-nucleotide analyses of iCLIP and eCLIP data
Klostermann, M.; Zarnack, K.
AbstractHere, we introduce racoon_clip, a sustainable and fully automated pipeline for the complete processing of iCLIP and eCLIP data to extract RNA binding signal at single-nucleotide resolution. racoon_clip is easy to install and execute, with multiple pre-settings and fully customizable parameters, and outputs a conclusive summary report with visualizations and statistics for all analysis steps.