Bioinformatics

Evaluation of somatic variant calling methods on high coverage tumour-only amplicon sequencing data in a clinical environment

Evaluation of somatic variant calling methods ...

Bioinformatics
Avatar
librarian
0 views
Metabolomic Fingerprinting from Dried Blood Spots Enables Individual Identification Across 1,257 Participants at 94% User-Level Accuracy

Metabolomic Fingerprinting from Dried Blood Sp...

Bioinformatics
Avatar
Pierrick Hauguel
0 views
TFBindFormer:A Cross-Attention Transformer for Transcription Factor--DNA Binding Prediction

TFBindFormer:A Cross-Attention Transformer for...

Bioinformatics
Avatar
librarian
1 view
FM-GPT: Bayesian fine mapping for phenome-wide transcriptome-wide association studies

FM-GPT: Bayesian fine mapping for phenome-wide...

Bioinformatics
Avatar
librarian
0 views
A Large Yield Model for Crop Production and Design in Western Canada

A Large Yield Model for Crop Production and De...

Bioinformatics
Avatar
librarian
1 view
scMultiPreDICT: A single-cell predictive framework with transcriptomic and epigenetic signatures

scMultiPreDICT: A single-cell predictive frame...

Bioinformatics
Avatar
librarian
6 views
DIANA: Deep Learning Identification and Assessment of Ancient DNA

DIANA: Deep Learning Identification and Assess...

Bioinformatics
Avatar
librarian
1 view
The Rayleigh Quotient and Contrastive Principal Component Analysis II

The Rayleigh Quotient and Contrastive Principa...

Bioinformatics
Avatar
Kayla Jackson
2 views
TopicVI: A Knowledge-guided deep interpretable model for resolving context-specific gene programs

TopicVI: A Knowledge-guided deep interpretable...

Bioinformatics
Avatar
librarian
2 views
Statistical Principles Define an Open-Source Differential Analysis Workflow for Mass Spectrometry Imaging Experiments with Complex Designs

Statistical Principles Define an Open-Source D...

Bioinformatics
Avatar
Ethan Rogers
2 views
Deep learning enables direct HLA typing from immunopeptidomics data

Deep learning enables direct HLA typing from i...

Bioinformatics
Avatar
Juliane Walz
3 views
Structure-aware geometric graph learning for modeling protease-substrate specificity at scale

Structure-aware geometric graph learning for m...

Bioinformatics
Avatar
librarian
2 views
MTB-KB: A Curated Knowledgebase of Mycobacterium tuberculosis Related Studies

MTB-KB: A Curated Knowledgebase of Mycobacteri...

Bioinformatics
Avatar
Cuidan Li
2 views
Synolog: A Scalable Synteny-Based Framework for Genome Architecture Characterization

Synolog: A Scalable Synteny-Based Framework fo...

Bioinformatics
Avatar
librarian
2 views
Benchmarking ambient RNA removal across droplet and well-plate platforms reveals artificial count generation as a critical failure mode of scAR and CellClear

Benchmarking ambient RNA removal across drople...

Bioinformatics
Avatar
Lukas Schroeder
2 views
MHCXGraph: A Graph-Based approach to detecting T cell receptor cross-reactivity

MHCXGraph: A Graph-Based approach to detecting...

Bioinformatics
Avatar
librarian
3 views
Impact of Regularization Methods and Outlier Removal on Unsupervised Sample Classification

Impact of Regularization Methods and Outlier R...

Bioinformatics
Avatar
Carol Heckman
3 views
Structure-Based and Stability-Validated Prioritization of BACE1 Inhibitors Integrating Meta-Ensemble QSAR and Molecular Dynamics

Structure-Based and Stability-Validated Priori...

Bioinformatics
Avatar
librarian
6 views
LOCOM2: Robust Differential Abundance Analysis for Microbiome Data

LOCOM2: Robust Differential Abundance Analysis...

Bioinformatics
Avatar
librarian
1 view
ViralMap: Predicting Features in Viral Proteins from Primary Sequence

ViralMap: Predicting Features in Viral Protein...

Bioinformatics
Avatar
Andrew Horton
2 views
ARACRA: Automated RNA-seq Analysis for Chemical Risk Assessment

ARACRA: Automated RNA-seq Analysis for Chemica...

Bioinformatics
Avatar
Vikas Kumar
5 views
A Grid-Search Framework for Dataset-Specific Calibration of Actigraphy Sleep Detection Algorithms

A Grid-Search Framework for Dataset-Specific C...

Bioinformatics
Avatar
librarian
4 views
GMIP-PLSR: A Nextflow Pipeline for GWAS and Multi-Omics Integration in Gene Prioritization Using PLSR

GMIP-PLSR: A Nextflow Pipeline for GWAS and Mu...

Bioinformatics
Avatar
librarian
4 views
Quantifying Scientific Consensus in Biomedical Hypotheses via LLM-Assisted Literature Screening

Quantifying Scientific Consensus in Biomedical...

Bioinformatics
Avatar
librarian
6 views
PoolParty: streamlined design of DNA sequence libraries in Python

PoolParty: streamlined design of DNA sequence ...

Bioinformatics
Avatar
librarian
7 views
Germline VCF Annotator: a lightweight pipeline for processing germline VCFs with robust variant extraction and read evidence quality control

Germline VCF Annotator: a lightweight pipeline...

Bioinformatics
Avatar
Zarko Manojlovic
8 views
Quaternion Spectral Fingerprinting of DNA: GPU-Accelerated Multi-Channel Fourier Analysis for Alignment-Free Genomics

Quaternion Spectral Fingerprinting of DNA: GPU...

Bioinformatics
Avatar
Mohamed Amine Bergach
7 views
Geometry-enhanced protein language modeling enables discovery of novel antibiotic resistance genes

Geometry-enhanced protein language modeling en...

Bioinformatics
Avatar
Yi Pan
4 views
Adaptive Integration of Heterogeneous Foundation Models to Find Histologically Predictable Genes in Breast Cancer

Adaptive Integration of Heterogeneous Foundati...

Bioinformatics
Avatar
Quan Nguyen
4 views
CPS: Mapping Physical Coordinates to High-Fidelity Spatial Transcriptomics via Privileged Multi-Scale Context Distillation

CPS: Mapping Physical Coordinates to High-Fide...

Bioinformatics
Avatar
librarian
10 views
Machine Learning-Enhanced Nanopore ITS Analysis: Evaluating CPU-GPU Pipelines for High-Accuracy Fungal Taxonomic Resolution

Machine Learning-Enhanced Nanopore ITS Analysi...

Bioinformatics
Avatar
librarian
11 views
AI predictions and the expansion of scientific frontiers: Evidence from structural biology

AI predictions and the expansion of scientific...

Bioinformatics
Avatar
librarian
7 views
Load more