Bioinformatics

BiGAT-Fusion: Node-Wise Gated Bidirectional Graph Attention for Drug Repurposing

BiGAT-Fusion: Node-Wise Gated Bidirectional Gr...

Bioinformatics
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Wenze Ding
11 views
scDynOmics: An Optimized Transformer Model for Representation Learning from Single-Cell Multiomics

scDynOmics: An Optimized Transformer Model for...

Bioinformatics
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Johanna Klughammer
2 views
ExoFILT: Transfer learning for robust and accelerated analysis of exocytosis single-particle tracking data

ExoFILT: Transfer learning for robust and acce...

Bioinformatics
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librarian
2 views
GTA-5: A Unified Graph Transformer Framework for Ligands and Protein Binding Sites - Part I: Constructing the PDB Pocket and Ligand Space

GTA-5: A Unified Graph Transformer Framework f...

Bioinformatics
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Bogdan Ciambur
3 views
Benchmarking niche identification via domain segmentation for spatial transcriptomics data

Benchmarking niche identification via domain s...

Bioinformatics
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Jinpu Cai
4 views
Exploring the mechanism of Panax Notoginseng in the treatment of skin wound based on network pharmacology and experimental verification

Exploring the mechanism of Panax Notoginseng i...

Bioinformatics
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librarian
3 views
Multiscale Symbolic Morpho-Barcoding Reveals Region-Specific and Scale-Dependent Neuronal Organization

Multiscale Symbolic Morpho-Barcoding Reveals R...

Bioinformatics
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librarian
2 views
Explainable AI for end-to-end pathogen target discovery and molecular design

Explainable AI for end-to-end pathogen target ...

Bioinformatics
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librarian
2 views
t2pmhc: A Structure-Informed Graph Neural Network to predict TCR-pMHC Binding

t2pmhc: A Structure-Informed Graph Neural Netw...

Bioinformatics
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librarian
4 views
DNA fragment length analysis using machine learning assisted vibrational spectroscopy

DNA fragment length analysis using machine lea...

Bioinformatics
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Stephen-John Sammut
2 views
Scalable mass-spectrometry-based molecular phylogeny with TreeMS2

Scalable mass-spectrometry-based molecular phy...

Bioinformatics
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librarian
0 views
Assessment of Generative De Novo Peptide Design Methods for G Protein-Coupled Receptors

Assessment of Generative De Novo Peptide Desig...

Bioinformatics
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librarian
0 views
Density-guided AlphaFold3 uncovers unmodelled conformations in β2-microglobulin

Density-guided AlphaFold3 uncovers unmodelled ...

Bioinformatics
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librarian
0 views
STCS: A Platform-Agnostic Framework for Cell-Level Reconstruction in Sequencing-Based Spatial Transcriptomics

STCS: A Platform-Agnostic Framework for Cell-L...

Bioinformatics
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librarian
0 views
A Query-to-Dashboard Framework for Reproducible PubMed-Scale Bibliometrics and Trend Intelligence

A Query-to-Dashboard Framework for Reproducibl...

Bioinformatics
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librarian
0 views
A single cell atlas of mouse podocytes upon injury identifies kidney zone-dependent responses.

A single cell atlas of mouse podocytes upon in...

Bioinformatics
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Stuart Shankland
3 views
MolX: A Geometric Foundation Model for Protein-Ligand Modelling

MolX: A Geometric Foundation Model for Protein...

Bioinformatics
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librarian
3 views
Evaluating Limits of Machine Learning-Assisted Raman Spectroscopy in Classification of Biological Samples

Evaluating Limits of Machine Learning-Assisted...

Bioinformatics
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librarian
1 view
Information Leakage in Enzyme Substrate Prediction

Information Leakage in Enzyme Substrate Prediction

Bioinformatics
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librarian
1 view
Random Matrix Theory-guided sparse PCA for single-cell RNA-seq data

Random Matrix Theory-guided sparse PCA for sin...

Bioinformatics
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librarian
7 views
ESMRank reveals a transferable axis of protein mutational constraint from overlapping variant effect assays

ESMRank reveals a transferable axis of protein...

Bioinformatics
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librarian
2 views
Achieving spatial multi-omics integration from unaligned serial sections with DIME

Achieving spatial multi-omics integration from...

Bioinformatics
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Pengyu Sun
4 views
DENcode: A model for haplotype-informed transmission probability of dengue virus

DENcode: A model for haplotype-informed transm...

Bioinformatics
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librarian
4 views
PantheonOS: An Evolvable Multi-Agent Framework for Automatic Genomics Discovery

PantheonOS: An Evolvable Multi-Agent Framework...

Bioinformatics
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librarian
21 views
AbiOmics: An End-to-End Pipeline to Train Machine Learning Models for Discrimination of Plant Abiotic Stresses Using Transcriptomic Profiling Data

AbiOmics: An End-to-End Pipeline to Train Mach...

Bioinformatics
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Yeong Deuk Jo
7 views
MAP: A Knowledge-driven Framework for Predicting Single-cell Responses for Unprofiled Drugs

MAP: A Knowledge-driven Framework for Predicti...

Bioinformatics
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librarian
4 views
Uncertainty-aware synthetic lethality prediction with pretrained foundation models

Uncertainty-aware synthetic lethality predicti...

Bioinformatics
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librarian
4 views
Graph Lens Lite: An interactive biological network viewer for displaying, exploring, and sharing disease pathobiology and drug mechanism of action models

Graph Lens Lite: An interactive biological net...

Bioinformatics
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librarian
4 views
Topological Data Analysis of Spatial Protein Expression in Multiplexed Spatial Proteomics Studies

Topological Data Analysis of Spatial Protein E...

Bioinformatics
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librarian
4 views
Spatial Mechanomics for Tissue-Scale Biomechanical Mapping and Multi-omics Integration

Spatial Mechanomics for Tissue-Scale Biomechan...

Bioinformatics
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librarian
3 views
ITSxRust: ITS region extraction with partial-chain recovery and structured diagnostics for long-read amplicon sequencing

ITSxRust: ITS region extraction with partial-c...

Bioinformatics
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librarian
2 views
A Benchmarking Study of Feature Screening Approaches Across Omics Classification Settings

A Benchmarking Study of Feature Screening Appr...

Bioinformatics
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Lisa Bramer
3 views
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