Systems Biology

X-Cell: Scaling Causal Perturbation Prediction Across Diverse Cellular Contexts via Diffusion Language Models

X-Cell: Scaling Causal Perturbation Prediction...

Systems Biology
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Ci Chu
3 views
New perspectives in assessing environmental risks for birds: a simple TKTD framework to link growth and reproduction energy budget to chemical stress

New perspectives in assessing environmental ri...

Systems Biology
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Virgile BAUDROT
2 views
A Multiscale Computational Architecture to Study Signaling Dynamics at Cell-Cell Interfaces

A Multiscale Computational Architecture to Stu...

Systems Biology
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librarian
2 views
MICA: Model-Informed Change-point Analysis

MICA: Model-Informed Change-point Analysis

Systems Biology
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librarian
2 views
GeNETop: Context-Specific Genome-Scale Constrained Models Using Network Topology, Flux Variability, and Transcriptomics

GeNETop: Context-Specific Genome-Scale Constra...

Systems Biology
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librarian
2 views
Dissecting the Network Architecture of a Plant Circadian Clock Model: Identifying Key Regulatory Mechanisms and Essential Interactions

Dissecting the Network Architecture of a Plant...

Systems Biology
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librarian
3 views
A Unified Dynamical-Systems and Control-Theoretic Model for Single-Cell Fate Dynamics

A Unified Dynamical-Systems and Control-Theore...

Systems Biology
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librarian
2 views
TRAILBLAZER: generative multicellular perturbation model of biology

TRAILBLAZER: generative multicellular perturba...

Systems Biology
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librarian
2 views
Expanding TheCellMap.org to visualize a genome-scale genetic interaction network for a human cell line

Expanding TheCellMap.org to visualize a genome...

Systems Biology
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Hannes Röst
3 views
Multicomplex Integrative Structural Modeling of a Human Histone Deacetylase Interactome

Multicomplex Integrative Structural Modeling o...

Systems Biology
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librarian
3 views
BoolDog: integrated Boolean and semi-quantitative network modelling in Python

BoolDog: integrated Boolean and semi-quantitat...

Systems Biology
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librarian
4 views
Interactome mapping in human excitatory neurons reveals novel risk genes and pathways in Alzheimer's disease

Interactome mapping in human excitatory neuron...

Systems Biology
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Yu Sun
10 views
A high-throughput cost-efficient in vitro platform for the screening of immune senomodulators

A high-throughput cost-efficient in vitro plat...

Systems Biology
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librarian
11 views
1100 Synthetic Benchmark Problems for Dynamic Modeling of Cellular Processes

1100 Synthetic Benchmark Problems for Dynamic ...

Systems Biology
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Niklas Neubrand
12 views
Detecting and Subtyping Ketoacidosis from Metabolomic Patterns in Forensic Casework

Detecting and Subtyping Ketoacidosis from Meta...

Systems Biology
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librarian
12 views
Mechanistic Modeling of Intrinsic Drug Resistance in Prostate Cancer Apoptosis Signaling

Mechanistic Modeling of Intrinsic Drug Resista...

Systems Biology
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librarian
15 views
Trans-acting Determinants of Gene Expression: Effects of Transcription Factor Affinity, Abundance, and Localization

Trans-acting Determinants of Gene Expression: ...

Systems Biology
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librarian
14 views
Reconstructing biologically coherent cellular profiles from imaging-based spatial transcriptomics

Reconstructing biologically coherent cellular ...

Systems Biology
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librarian
16 views
dAMN: a genome scale neural-mechanistic hybrid model to predict bacterial growth dynamics

dAMN: a genome scale neural-mechanistic hybrid...

Systems Biology
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librarian
15 views
A systemic circadian nicotinic acid riboside (NaR) signal engages the unfolded protein response and adipogenesis via the prefoldin complex

A systemic circadian nicotinic acid riboside (...

Systems Biology
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librarian
16 views
Molecular Transducers of Physical Activity Consortium (MoTrPAC): Initial Insights into the Dynamic Human Responses to Exercise

Molecular Transducers of Physical Activity Con...

Systems Biology
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librarian
18 views
Why Boolean network control tools disagree: a taxonomy of control problems

Why Boolean network control tools disagree: a ...

Systems Biology
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Kyungduk Moon
13 views
TGFβ signaling systems are prone to inhibition and ligand competition by coreceptor

TGFβ signaling systems are prone to inhibition...

Systems Biology
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librarian
13 views
STRESS HISTORY ESTABLISHES A TRANSIENT TOLERANT STATE THAT SHAPES ANTIBIOTIC SURVIVAL UPON RESUSCITATION

STRESS HISTORY ESTABLISHES A TRANSIENT TOLERAN...

Systems Biology
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librarian
18 views
Comparison of different computational frameworks for metabolic modeling from single-cell transcriptomics data in glioblastoma

Comparison of different computational framewor...

Systems Biology
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librarian
15 views
AOPGraphExplorer 2.0: An Interactive Graph-Based Platform for Multi-Domain Mechanistic Annotation and Exploration of Adverse Outcome Pathways

AOPGraphExplorer 2.0: An Interactive Graph-Bas...

Systems Biology
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librarian
27 views
Single-Cell Spatial Proteomics Uncovers Molecular Interconnectivity among Hallmarks of Aging

Single-Cell Spatial Proteomics Uncovers Molecu...

Systems Biology
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Chuankai Zhou
22 views
Variation of Human Transfer RNA Demand and Supply

Variation of Human Transfer RNA Demand and Supply

Systems Biology
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Marius Külp
39 views
The Potential Effect of Vitamin D Supplement on Selected Coagulability Predictors in Vape-Exposed Female Rats

The Potential Effect of Vitamin D Supplement o...

Systems Biology
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librarian
17 views
Aging under immunosuppression reshapes human immune compartments and lowers clinical alloreactivity after heart transplantation

Aging under immunosuppression reshapes human i...

Systems Biology
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Kaushik Amancherla
20 views
CellSwarm: LLM-Driven Cell Agents Recapitulate Tumor Microenvironment Dynamics and Sense Indirect Genetic Perturbations

CellSwarm: LLM-Driven Cell Agents Recapitulate...

Systems Biology
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Xiuliang Cui
31 views
NF-κB transcriptionally enhances p53 accumulation dynamics hampering DNA repair

NF-κB transcriptionally enhances p53 accumulat...

Systems Biology
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Samuel Zambrano
24 views
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