Wed, 07 Feb 2024 - Bioinformatics papers

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This list was compiled by ScienceCast's automated system based on data on new preprints for Wed, 07 Feb 2024 on bioRxiv in the Bioinformatics category.
Casts
A Novel, Open-Source Virtual Reality Platform for Dendritic Spine Analysis
Andrew Tan
OligoFormer: an accurate and robust prediction method for siRNA design
AttentionPert: Accurately Modeling Multiplexed Genetic Perturbations with Multi-scale Effects
PKSmart: An Open-Source Computational Model to Predict in vivo Pharmacokinetics of Small Molecules
BayVarC: an ultra-sensitive ctDNA variant caller using Bayesian approach
Yunfu Hu
Commonly used software tools produce conflicting and overly-optimistic AUPRC values
Stephen Kwok-Wing Tsui
Addressing the antibody germline bias and its effect on language models for improved antibody design
Cerebra: a computationally efficient framework for accurate protein structure prediction
Haipeng Gong
GraphCompass: Spatial metrics for differential analyses of cell organization across conditions
Fabian Theis
Deep learning-based proteomics enables accurate classification of bulk and single-cell samples
Titus Brinker